This stackoverflow post mentions an old version of CMake and making on Windows. More googling led to FindDCMTK on cmake.org so that I could just edit my CMakelists.txt to read
...snip...
find_package(USB-1 REQUIRED)
find_package(OpenCV REQUIRED)
find_package(DCMTK REQUIRED)
include_directories($(USB_1_INCLUDE_DIR))
include_directories($(OpenCV_INCLUDE_DIR))
include_directories($(DCMTK_INCLUDE_DIRS))
... snip ...
find_package(OpenCV REQUIRED)
find_package(DCMTK REQUIRED)
include_directories($(USB_1_INCLUDE_DIR))
include_directories($(OpenCV_INCLUDE_DIR))
include_directories($(DCMTK_INCLUDE_DIRS))
... snip ...
target_link_libraries(${FILENAME1} ${LIBUSB_1_LIBRARIES} ${OpenCV_LIBS} ${DCMTK_LIBRARIES} )
... snip ...
That worked nicely, without having to manually find the libraries and so on.
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